WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C32H11.1b.1 Sequence Name  C32H11.1b.1
Length (nt)  1440   Chromosome Location  IV: 12913058-12914962
Chromosome . Primary Identifier  IV Chromosome Location . Start  12913058
Chromosome Location . End  12914962 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C32H11.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007864 irg-6 C32H11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C32H11.1b C32H11.1b 1389   IV: 12913103-12913235

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C32H11.1b.1 12913058 12914962 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon148973   178   IV: 12913058-12913235 Caenorhabditis elegans
Exon148976   214   IV: 12913291-12913504 Caenorhabditis elegans
Exon148978   110   IV: 12913548-12913657 Caenorhabditis elegans
Exon148980   62   IV: 12913704-12913765 Caenorhabditis elegans
Exon148982   155   IV: 12913834-12913988 Caenorhabditis elegans
Exon148984   315   IV: 12914038-12914352 Caenorhabditis elegans
Exon148986   113   IV: 12914511-12914623 Caenorhabditis elegans
Exon148987   293   IV: 12914670-12914962 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C32H11.1b.1 12913058 12914962 -1

1 Sequence

Length
1440

1 Sequence Ontology Term

Identifier Name Description
transcript