WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55G11.7.1 Sequence Name  F55G11.7.1
Length (nt)  1164   Chromosome Location  IV: 12960436-12962155
Chromosome . Primary Identifier  IV Chromosome Location . Start  12960436
Chromosome Location . End  12962155 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55G11.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010127 F55G11.7 F55G11.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55G11.7 F55G11.7 1029   IV: 12960536-12960596

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F55G11.7.1 12960436 12962155 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon149064   161   IV: 12960436-12960596 Caenorhabditis elegans
Exon149065   229   IV: 12960644-12960872 Caenorhabditis elegans
Exon149066   110   IV: 12961055-12961164 Caenorhabditis elegans
Exon149067   205   IV: 12961223-12961427 Caenorhabditis elegans
Exon149068   116   IV: 12961543-12961658 Caenorhabditis elegans
Exon149069   146   IV: 12961715-12961860 Caenorhabditis elegans
Exon149070   62   IV: 12961914-12961975 Caenorhabditis elegans
Exon149071   135   IV: 12962021-12962155 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F55G11.7.1 12960436 12962155 1

1 Sequence

Length
1164

1 Sequence Ontology Term

Identifier Name Description
transcript