WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K10D11.1.1 Sequence Name  K10D11.1.1
Length (nt)  1140   Chromosome Location  IV: 12976303-12978343
Chromosome . Primary Identifier  IV Chromosome Location . Start  12976303
Chromosome Location . End  12978343 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K10D11.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010745 dod-17 K10D11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K10D11.1 K10D11.1 1026   IV: 12976308-12976368

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K10D11.1.1 12976303 12978343 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon149121   66   IV: 12976303-12976368 Caenorhabditis elegans
Exon149122   229   IV: 12976424-12976652 Caenorhabditis elegans
Exon149123   110   IV: 12976942-12977051 Caenorhabditis elegans
Exon149124   202   IV: 12977116-12977317 Caenorhabditis elegans
Exon149125   116   IV: 12977667-12977782 Caenorhabditis elegans
Exon149126   146   IV: 12977832-12977977 Caenorhabditis elegans
Exon149127   62   IV: 12978026-12978087 Caenorhabditis elegans
Exon149128   209   IV: 12978135-12978343 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K10D11.1.1 12976303 12978343 1

1 Sequence

Length
1140

1 Sequence Ontology Term

Identifier Name Description
transcript