WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K10D11.3a.1 Sequence Name  K10D11.3a.1
Length (nt)  1643   Chromosome Location  IV: 12982119-12986134
Chromosome . Primary Identifier  IV Chromosome Location . Start  12982119
Chromosome Location . End  12986134 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K10D11.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010747 K10D11.3 K10D11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K10D11.3a K10D11.3a 1509   IV: 12982207-12982256

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K10D11.3a.1 12982119 12986134 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon149192   138   IV: 12982119-12982256 Caenorhabditis elegans
Exon149195   146   IV: 12982300-12982445 Caenorhabditis elegans
Exon149198   109   IV: 12982549-12982657 Caenorhabditis elegans
Exon149201   105   IV: 12982699-12982803 Caenorhabditis elegans
Exon149204   110   IV: 12982876-12982985 Caenorhabditis elegans
Exon149207   223   IV: 12983134-12983356 Caenorhabditis elegans
Exon149210   223   IV: 12983403-12983625 Caenorhabditis elegans
Exon149213   107   IV: 12983674-12983780 Caenorhabditis elegans
Exon149216   119   IV: 12983825-12983943 Caenorhabditis elegans
Exon149222   244   IV: 12985705-12985948 Caenorhabditis elegans
Exon149223   119   IV: 12986016-12986134 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K10D11.3a.1 12982119 12986134 -1

1 Sequence

Length
1643

1 Sequence Ontology Term

Identifier Name Description
transcript