WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K10D11.3b.1 Sequence Name  K10D11.3b.1
Length (nt)  1571   Chromosome Location  IV: 12982207-12985465
Chromosome . Primary Identifier  IV Chromosome Location . Start  12982207
Chromosome Location . End  12985465 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K10D11.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010747 K10D11.3 K10D11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K10D11.3b K10D11.3b 1479   IV: 12982207-12982256

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K10D11.3b.1 12982207 12985465 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon149194   50   IV: 12982207-12982256 Caenorhabditis elegans
Exon149196   146   IV: 12982300-12982445 Caenorhabditis elegans
Exon149199   109   IV: 12982549-12982657 Caenorhabditis elegans
Exon149202   105   IV: 12982699-12982803 Caenorhabditis elegans
Exon149205   110   IV: 12982876-12982985 Caenorhabditis elegans
Exon149208   223   IV: 12983134-12983356 Caenorhabditis elegans
Exon149211   223   IV: 12983403-12983625 Caenorhabditis elegans
Exon149214   107   IV: 12983674-12983780 Caenorhabditis elegans
Exon149217   119   IV: 12983825-12983943 Caenorhabditis elegans
Exon149220   220   IV: 12985039-12985258 Caenorhabditis elegans
Exon149221   159   IV: 12985307-12985465 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K10D11.3b.1 12982207 12985465 -1

1 Sequence

Length
1571

1 Sequence Ontology Term

Identifier Name Description
transcript