WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49E11.1g.1 Sequence Name  F49E11.1g.1
Length (nt)  2403   Chromosome Location  IV: 13009158-13034518
Chromosome . Primary Identifier  IV Chromosome Location . Start  13009158
Chromosome Location . End  13034518 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49E11.1g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003150 mbk-2 F49E11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49E11.1g F49E11.1g 2403   IV: 13009158-13009229

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F49E11.1g.1 13009158 13034518 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon149201   72   IV: 13009158-13009229 Caenorhabditis elegans
Exon149205   56   IV: 13009460-13009515 Caenorhabditis elegans
Exon149210   211   IV: 13014614-13014824 Caenorhabditis elegans
Exon149212   103   IV: 13014899-13015001 Caenorhabditis elegans
Exon149216   63   IV: 13015053-13015115 Caenorhabditis elegans
Exon149221   221   IV: 13023834-13024054 Caenorhabditis elegans
Exon149225   154   IV: 13024465-13024618 Caenorhabditis elegans
Exon149239   175   IV: 13031594-13031768 Caenorhabditis elegans
Exon149254   316   IV: 13032540-13032855 Caenorhabditis elegans
Exon149268   264   IV: 13032912-13033175 Caenorhabditis elegans
Exon149278   702   IV: 13033229-13033930 Caenorhabditis elegans
Exon149290   66   IV: 13034453-13034518 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F49E11.1g.1 13009158 13034518 1

1 Sequence

Length
2403

1 Sequence Ontology Term

Identifier Name Description
transcript