WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49E11.1c.1 Sequence Name  F49E11.1c.1
Length (nt)  3520   Chromosome Location  IV: 13009158-13035955
Chromosome . Primary Identifier  IV Chromosome Location . Start  13009158
Chromosome Location . End  13035955 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49E11.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003150 mbk-2 F49E11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49E11.1c F49E11.1c 2391   IV: 13009158-13009229

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F49E11.1c.1 13009158 13035955 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon149255   72   IV: 13009158-13009229 Caenorhabditis elegans
Exon149259   56   IV: 13009460-13009515 Caenorhabditis elegans
Exon149264   211   IV: 13014614-13014824 Caenorhabditis elegans
Exon149270   217   IV: 13014899-13015115 Caenorhabditis elegans
Exon149275   221   IV: 13023834-13024054 Caenorhabditis elegans
Exon149279   154   IV: 13024465-13024618 Caenorhabditis elegans
Exon149291   175   IV: 13031594-13031768 Caenorhabditis elegans
Exon149305   316   IV: 13032540-13032855 Caenorhabditis elegans
Exon149319   264   IV: 13032912-13033175 Caenorhabditis elegans
Exon149332   702   IV: 13033229-13033930 Caenorhabditis elegans
Exon149356   1132   IV: 13034824-13035955 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F49E11.1c.1 13009158 13035955 1

1 Sequence

Length
3520

1 Sequence Ontology Term

Identifier Name Description
transcript