WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49E11.1m.1 Sequence Name  F49E11.1m.1
Length (nt)  1509   Chromosome Location  IV: 13031334-13034826
Chromosome . Primary Identifier  IV Chromosome Location . Start  13031334
Chromosome Location . End  13034826 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49E11.1m.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003150 mbk-2 F49E11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49E11.1m F49E11.1m 1509   IV: 13031334-13031382

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F49E11.1m.1 13031334 13034826 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon149232   49   IV: 13031334-13031382 Caenorhabditis elegans
Exon149244   175   IV: 13031594-13031768 Caenorhabditis elegans
Exon149260   316   IV: 13032540-13032855 Caenorhabditis elegans
Exon149274   264   IV: 13032912-13033175 Caenorhabditis elegans
Exon149284   702   IV: 13033229-13033930 Caenorhabditis elegans
Exon149296   3   IV: 13034824-13034826 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F49E11.1m.1 13031334 13034826 1

1 Sequence

Length
1509

1 Sequence Ontology Term

Identifier Name Description
transcript