WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49E11.3.1 Sequence Name  F49E11.3.1
Length (nt)  1754   Chromosome Location  IV: 13042391-13047043
Chromosome . Primary Identifier  IV Chromosome Location . Start  13042391
Chromosome Location . End  13047043 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49E11.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000134 amt-2 F49E11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49E11.3 F49E11.3 1548   IV: 13042412-13042646

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F49E11.3.1 13042391 13047043 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon149311   256   IV: 13042391-13042646 Caenorhabditis elegans
Exon149312   131   IV: 13043121-13043251 Caenorhabditis elegans
Exon149313   70   IV: 13043299-13043368 Caenorhabditis elegans
Exon149316   149   IV: 13044964-13045112 Caenorhabditis elegans
Exon149317   244   IV: 13045181-13045424 Caenorhabditis elegans
Exon149318   194   IV: 13045791-13045984 Caenorhabditis elegans
Exon149319   123   IV: 13046193-13046315 Caenorhabditis elegans
Exon149320   120   IV: 13046360-13046479 Caenorhabditis elegans
Exon149321   131   IV: 13046530-13046660 Caenorhabditis elegans
Exon149322   336   IV: 13046708-13047043 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F49E11.3.1 13042391 13047043 1

1 Sequence

Length
1754

1 Sequence Ontology Term

Identifier Name Description
transcript