WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49E11.5.1 Sequence Name  F49E11.5.1
Length (nt)  702   Chromosome Location  IV: 13048457-13049859
Chromosome . Primary Identifier  IV Chromosome Location . Start  13048457
Chromosome Location . End  13049859 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49E11.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009891 scl-10 F49E11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49E11.5 F49E11.5 639   IV: 13048496-13048544

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F49E11.5.1 13048457 13049859 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon149328   88   IV: 13048457-13048544 Caenorhabditis elegans
Exon149329   389   IV: 13048594-13048982 Caenorhabditis elegans
Exon149330   101   IV: 13049558-13049658 Caenorhabditis elegans
Exon149331   124   IV: 13049736-13049859 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F49E11.5.1 13048457 13049859 1

1 Sequence

Length
702

1 Sequence Ontology Term

Identifier Name Description
transcript