WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49E11.7.1 Sequence Name  F49E11.7.1
Length (nt)  1349   Chromosome Location  IV: 13052868-13055301
Chromosome . Primary Identifier  IV Chromosome Location . Start  13052868
Chromosome Location . End  13055301 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49E11.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009893 F49E11.7 F49E11.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49E11.7 F49E11.7 1155   IV: 13053297-13053380

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F49E11.7.1 13052868 13055301 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon149337   39   IV: 13052868-13052906 Caenorhabditis elegans
Exon149340   92   IV: 13053289-13053380 Caenorhabditis elegans
Exon149341   209   IV: 13053427-13053635 Caenorhabditis elegans
Exon149343   76   IV: 13053685-13053760 Caenorhabditis elegans
Exon149345   243   IV: 13053809-13054051 Caenorhabditis elegans
Exon149347   98   IV: 13054102-13054199 Caenorhabditis elegans
Exon149349   115   IV: 13054610-13054724 Caenorhabditis elegans
Exon149351   84   IV: 13054773-13054856 Caenorhabditis elegans
Exon149353   393   IV: 13054909-13055301 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F49E11.7.1 13052868 13055301 1

1 Sequence

Length
1349

1 Sequence Ontology Term

Identifier Name Description
transcript