WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F49E11.11 Sequence Name  F49E11.11
Length (nt)  636   Chromosome Location  IV: 13059628-13059670
Chromosome . Primary Identifier  IV Chromosome Location . Start  13059628
Chromosome Location . End  13059670
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49E11.11

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE05907 SCL-3 22.7 211 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00047839
WBRNAi00015307
WBRNAi00032529

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F49E11.11 13059628 13059670 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009896 scl-3 F49E11.11 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:F49E11.11 13059628 13059670 1
CDS:F49E11.11 13059722 13059858 1
CDS:F49E11.11 13060101 13060456 1
CDS:F49E11.11 13060503 13060602 1

1 Sequence

Length
636

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F49E11.11.1 F49E11.11.1 773   IV: 13059584-13060695