WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C39E9.4.1 Sequence Name  C39E9.4.1
Length (nt)  763   Chromosome Location  IV: 13068751-13069994
Chromosome . Primary Identifier  IV Chromosome Location . Start  13068751
Chromosome Location . End  13069994 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C39E9.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008028 scl-6 C39E9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C39E9.4 C39E9.4 630   IV: 13068768-13068807

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C39E9.4.1 13068751 13069994 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon149383   57   IV: 13068751-13068807 Caenorhabditis elegans
Exon149384   140   IV: 13068855-13068994 Caenorhabditis elegans
Exon149385   350   IV: 13069346-13069695 Caenorhabditis elegans
Exon149386   216   IV: 13069779-13069994 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C39E9.4.1 13068751 13069994 1

1 Sequence

Length
763

1 Sequence Ontology Term

Identifier Name Description
transcript