WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C39E9.7.1 Sequence Name  C39E9.7.1
Length (nt)  1614   Chromosome Location  IV: 13072661-13076720
Chromosome . Primary Identifier  IV Chromosome Location . Start  13072661
Chromosome Location . End  13076720 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C39E9.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008031 C39E9.7 C39E9.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C39E9.7 C39E9.7 1497   IV: 13072699-13072865

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C39E9.7.1 13072661 13076720 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon149395   205   IV: 13072661-13072865 Caenorhabditis elegans
Exon149396   181   IV: 13073456-13073636 Caenorhabditis elegans
Exon149398   115   IV: 13073965-13074079 Caenorhabditis elegans
Exon149400   269   IV: 13074125-13074393 Caenorhabditis elegans
Exon149402   275   IV: 13074455-13074729 Caenorhabditis elegans
Exon149405   110   IV: 13074912-13075021 Caenorhabditis elegans
Exon149407   178   IV: 13075068-13075245 Caenorhabditis elegans
Exon149409   124   IV: 13076177-13076300 Caenorhabditis elegans
Exon149411   89   IV: 13076493-13076581 Caenorhabditis elegans
Exon149413   68   IV: 13076653-13076720 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C39E9.7.1 13072661 13076720 -1

1 Sequence

Length
1614

1 Sequence Ontology Term

Identifier Name Description
transcript