WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C39E9.7.2 Sequence Name  C39E9.7.2
Length (nt)  1553   Chromosome Location  IV: 13072661-13076588
Chromosome . Primary Identifier  IV Chromosome Location . Start  13072661
Chromosome Location . End  13076588 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C39E9.7.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008031 C39E9.7 C39E9.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C39E9.7 C39E9.7 1497   IV: 13072699-13072865

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C39E9.7.2 13072661 13076588 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon149394   205   IV: 13072661-13072865 Caenorhabditis elegans
Exon149397   181   IV: 13073456-13073636 Caenorhabditis elegans
Exon149399   115   IV: 13073965-13074079 Caenorhabditis elegans
Exon149401   269   IV: 13074125-13074393 Caenorhabditis elegans
Exon149403   275   IV: 13074455-13074729 Caenorhabditis elegans
Exon149406   110   IV: 13074912-13075021 Caenorhabditis elegans
Exon149408   178   IV: 13075068-13075245 Caenorhabditis elegans
Exon149410   124   IV: 13076177-13076300 Caenorhabditis elegans
Exon149412   96   IV: 13076493-13076588 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C39E9.7.2 13072661 13076588 -1

1 Sequence

Length
1553

1 Sequence Ontology Term

Identifier Name Description
transcript