WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C39E9.8d.1 Sequence Name  C39E9.8d.1
Length (nt)  564   Chromosome Location  IV: 13080866-13082561
Chromosome . Primary Identifier  IV Chromosome Location . Start  13080866
Chromosome Location . End  13082561 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C39E9.8d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008032 C39E9.8 C39E9.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C39E9.8d C39E9.8d 564   IV: 13080866-13080919

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C39E9.8d.1 13080866 13082561 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon149476   54   IV: 13080866-13080919 Caenorhabditis elegans
Exon149481   95   IV: 13080965-13081059 Caenorhabditis elegans
Exon149486   216   IV: 13081110-13081325 Caenorhabditis elegans
Exon149490   120   IV: 13082317-13082436 Caenorhabditis elegans
Exon149495   79   IV: 13082483-13082561 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C39E9.8d.1 13080866 13082561 1

1 Sequence

Length
564

1 Sequence Ontology Term

Identifier Name Description
transcript