WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0564.10d.1 Sequence Name  B0564.10d.1
Length (nt)  546   Chromosome Location  IV: 13121172-13124255
Chromosome . Primary Identifier  IV Chromosome Location . Start  13121172
Chromosome Location . End  13124255 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0564.10d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006766 unc-30 B0564.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0564.10d B0564.10d 546   IV: 13121172-13121228

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0564.10d.1 13121172 13124255 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon149560   57   IV: 13121172-13121228 Caenorhabditis elegans
Exon149564   162   IV: 13121652-13121813 Caenorhabditis elegans
Exon149568   117   IV: 13122141-13122257 Caenorhabditis elegans
Exon149572   77   IV: 13122315-13122391 Caenorhabditis elegans
Exon149574   133   IV: 13124123-13124255 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0564.10d.1 13121172 13124255 1

1 Sequence

Length
546

1 Sequence Ontology Term

Identifier Name Description
transcript