WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0564.6.1 Sequence Name  B0564.6.1
Length (nt)  1272   Chromosome Location  IV: 13130440-13133230
Chromosome . Primary Identifier  IV Chromosome Location . Start  13130440
Chromosome Location . End  13133230 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0564.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007206 B0564.6 B0564.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0564.6 B0564.6 1272   IV: 13130440-13130623

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0564.6.1 13130440 13133230 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon149577   184   IV: 13130440-13130623 Caenorhabditis elegans
Exon149578   154   IV: 13130867-13131020 Caenorhabditis elegans
Exon149579   178   IV: 13131178-13131355 Caenorhabditis elegans
Exon149580   137   IV: 13131405-13131541 Caenorhabditis elegans
Exon149581   150   IV: 13131779-13131928 Caenorhabditis elegans
Exon149582   259   IV: 13132230-13132488 Caenorhabditis elegans
Exon149583   210   IV: 13133021-13133230 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0564.6.1 13130440 13133230 1

1 Sequence

Length
1272

1 Sequence Ontology Term

Identifier Name Description
transcript