WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0564.9.1 Sequence Name  B0564.9.1
Length (nt)  1272   Chromosome Location  IV: 13136032-13138822
Chromosome . Primary Identifier  IV Chromosome Location . Start  13136032
Chromosome Location . End  13138822 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0564.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007208 B0564.9 B0564.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0564.9 B0564.9 1272   IV: 13136032-13136215

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0564.9.1 13136032 13138822 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon149584   184   IV: 13136032-13136215 Caenorhabditis elegans
Exon149585   154   IV: 13136459-13136612 Caenorhabditis elegans
Exon149586   178   IV: 13136770-13136947 Caenorhabditis elegans
Exon149587   137   IV: 13136997-13137133 Caenorhabditis elegans
Exon149588   150   IV: 13137371-13137520 Caenorhabditis elegans
Exon149589   259   IV: 13137822-13138080 Caenorhabditis elegans
Exon149590   210   IV: 13138613-13138822 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0564.9.1 13136032 13138822 1

1 Sequence

Length
1272

1 Sequence Ontology Term

Identifier Name Description
transcript