WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F09E8.1a Sequence Name  F09E8.1a
Length (nt)  681   Chromosome Location  IV: 13138991-13139106
Chromosome . Primary Identifier  IV Chromosome Location . Start  13138991
Chromosome Location . End  13139106
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09E8.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE47573 SPE-43, isoform a 25.0 226 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00044134
WBRNAi00012982
WBRNAi00030711

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F09E8.1a 13138991 13139106 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008623 spe-43 F09E8.1 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:F09E8.1a 13138991 13139106 -1
CDS:F09E8.1a 13141543 13141662 -1
CDS:F09E8.1a 13141709 13141864 -1
CDS:F09E8.1a 13141914 13142042 -1
CDS:F09E8.1a 13142147 13142254 -1
CDS:F09E8.1a 13142303 13142354 -1

1 Sequence

Length
681

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F09E8.1a.1 F09E8.1a.1 681   IV: 13138991-13142354