WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F09E8.2b.1 Sequence Name  F09E8.2b.1
Length (nt)  1105   Chromosome Location  IV: 13150597-13154441
Chromosome . Primary Identifier  IV Chromosome Location . Start  13150597
Chromosome Location . End  13154441 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09E8.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008624 crld-1 F09E8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F09E8.2b F09E8.2b 933   IV: 13150708-13150781

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F09E8.2b.1 13150597 13154441 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon149607   185   IV: 13150597-13150781 Caenorhabditis elegans
Exon149612   138   IV: 13151986-13152123 Caenorhabditis elegans
Exon149616   99   IV: 13152614-13152712 Caenorhabditis elegans
Exon149620   127   IV: 13152772-13152898 Caenorhabditis elegans
Exon149624   95   IV: 13152981-13153075 Caenorhabditis elegans
Exon149628   103   IV: 13153746-13153848 Caenorhabditis elegans
Exon149632   97   IV: 13153902-13153998 Caenorhabditis elegans
Exon149636   83   IV: 13154062-13154144 Caenorhabditis elegans
Exon149639   124   IV: 13154213-13154336 Caenorhabditis elegans
Exon149643   54   IV: 13154388-13154441 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F09E8.2b.1 13150597 13154441 -1

1 Sequence

Length
1105

1 Sequence Ontology Term

Identifier Name Description
transcript