WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F09E8.2a.2 Sequence Name  F09E8.2a.2
Length (nt)  1361   Chromosome Location  IV: 13150620-13154343
Chromosome . Primary Identifier  IV Chromosome Location . Start  13150620
Chromosome Location . End  13154343 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09E8.2a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008624 crld-1 F09E8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F09E8.2a F09E8.2a 1071   IV: 13150896-13151107

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F09E8.2a.2 13150620 13154343 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon149608   488   IV: 13150620-13151107 Caenorhabditis elegans
Exon149611   138   IV: 13151986-13152123 Caenorhabditis elegans
Exon149615   99   IV: 13152614-13152712 Caenorhabditis elegans
Exon149619   127   IV: 13152772-13152898 Caenorhabditis elegans
Exon149623   95   IV: 13152981-13153075 Caenorhabditis elegans
Exon149627   103   IV: 13153746-13153848 Caenorhabditis elegans
Exon149631   97   IV: 13153902-13153998 Caenorhabditis elegans
Exon149635   83   IV: 13154062-13154144 Caenorhabditis elegans
Exon149641   131   IV: 13154213-13154343 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F09E8.2a.2 13150620 13154343 -1

1 Sequence

Length
1361

1 Sequence Ontology Term

Identifier Name Description
transcript