WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F09E8.2a.1 Sequence Name  F09E8.2a.1
Length (nt)  1224   Chromosome Location  IV: 13150804-13154441
Chromosome . Primary Identifier  IV Chromosome Location . Start  13150804
Chromosome Location . End  13154441 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09E8.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008624 crld-1 F09E8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F09E8.2a F09E8.2a 1071   IV: 13150896-13151107

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F09E8.2a.1 13150804 13154441 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon149664   304   IV: 13150804-13151107 Caenorhabditis elegans
Exon149665   138   IV: 13151986-13152123 Caenorhabditis elegans
Exon149669   99   IV: 13152614-13152712 Caenorhabditis elegans
Exon149673   127   IV: 13152772-13152898 Caenorhabditis elegans
Exon149677   95   IV: 13152981-13153075 Caenorhabditis elegans
Exon149681   103   IV: 13153746-13153848 Caenorhabditis elegans
Exon149685   97   IV: 13153902-13153998 Caenorhabditis elegans
Exon149689   83   IV: 13154062-13154144 Caenorhabditis elegans
Exon149693   124   IV: 13154213-13154336 Caenorhabditis elegans
Exon149697   54   IV: 13154388-13154441 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F09E8.2a.1 13150804 13154441 -1

1 Sequence

Length
1224

1 Sequence Ontology Term

Identifier Name Description
transcript