WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F09E8.5.1 Sequence Name  F09E8.5.1
Length (nt)  739   Chromosome Location  IV: 13165481-13166815
Chromosome . Primary Identifier  IV Chromosome Location . Start  13165481
Chromosome Location . End  13166815 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09E8.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008625 scl-14 F09E8.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F09E8.5 F09E8.5 627   IV: 13165533-13165572

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F09E8.5.1 13165481 13166815 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon149676   92   IV: 13165481-13165572 Caenorhabditis elegans
Exon149677   137   IV: 13166052-13166188 Caenorhabditis elegans
Exon149678   350   IV: 13166258-13166607 Caenorhabditis elegans
Exon149679   160   IV: 13166656-13166815 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F09E8.5.1 13165481 13166815 1

1 Sequence

Length
739

1 Sequence Ontology Term

Identifier Name Description
transcript