WormMine: MRNA Transcript:F09E8.3a.1

• WormMine ID: Transcript:F09E8.3a.1
• Sequence Name: F09E8.3a.1
• Length (nt): 4216
• Chromosome Location: IV: 13155233-13164054
• Chromosome . Primary Identifier: IV
• Chromosome Location . Start: 13155233
• Chromosome Location . End: 13164054
• Method: Coding_transcript

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: F09E8.3a.1

Genomics

1 Gene

WormBase Gene ID	Gene Name	Sequence Name	Organism
WBGene00003421	msh-5	F09E8.3	Caenorhabditis elegans

Other

1 CDSs

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:F09E8.3a	F09E8.3a	4110	IV: 13155233-13155386

1 Chromosome

• WormBase ID: IV
• Organism: Caenorhabditis elegans
• Length (nt): 17493829

1 Chromosome Location

• Feature . Primary Identifier: Transcript:F09E8.3a.1
• Start: 13155233
• End: 13164054
• Strand: 1

3 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)
• WormBase C. elegans transcript sequence (Fasta)

20 Exons

WormBase ID	Name	Sequence Name	Length (nt)	Chromosome Location	Organism
Exon149699			154	IV: 13155233-13155386	Caenorhabditis elegans
Exon149700			159	IV: 13155438-13155596	Caenorhabditis elegans
Exon149701			81	IV: 13155644-13155724	Caenorhabditis elegans
Exon149702			198	IV: 13155781-13155978	Caenorhabditis elegans
Exon149703			119	IV: 13156028-13156146	Caenorhabditis elegans
Exon149704			110	IV: 13156193-13156302	Caenorhabditis elegans
Exon149705			226	IV: 13156370-13156595	Caenorhabditis elegans
Exon149706			63	IV: 13157365-13157427	Caenorhabditis elegans
Exon149707			111	IV: 13157478-13157588	Caenorhabditis elegans
Exon149708			75	IV: 13157647-13157721	Caenorhabditis elegans
Exon149709			73	IV: 13157996-13158068	Caenorhabditis elegans
Exon149711			166	IV: 13158116-13158281	Caenorhabditis elegans
Exon149713			787	IV: 13158767-13159553	Caenorhabditis elegans
Exon149715			242	IV: 13159629-13159870	Caenorhabditis elegans
Exon149717			162	IV: 13160421-13160582	Caenorhabditis elegans
Exon149719			255	IV: 13160629-13160883	Caenorhabditis elegans
Exon149721			210	IV: 13161658-13161867	Caenorhabditis elegans
Exon149723			108	IV: 13161915-13162022	Caenorhabditis elegans
Exon149725			489	IV: 13162750-13163238	Caenorhabditis elegans
Exon149728			428	IV: 13163627-13164054	Caenorhabditis elegans

1 Locations

• Feature . Primary Identifier: Transcript:F09E8.3a.1
• Start: 13155233
• End: 13164054
• Strand: 1

1 Sequence

• Length: 4216

1 Sequence Ontology Term

• Name: transcript