WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58D2.2.1 Sequence Name  F58D2.2.1
Length (nt)  1974   Chromosome Location  IV: 13189767-13192349
Chromosome . Primary Identifier  IV Chromosome Location . Start  13189767
Chromosome Location . End  13192349 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58D2.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010241 F58D2.2 F58D2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58D2.2 F58D2.2 1836   IV: 13189839-13189845

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58D2.2.1 13189767 13192349 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon149719   79   IV: 13189767-13189845 Caenorhabditis elegans
Exon149720   548   IV: 13190166-13190713 Caenorhabditis elegans
Exon149721   174   IV: 13190763-13190936 Caenorhabditis elegans
Exon149722   540   IV: 13191015-13191554 Caenorhabditis elegans
Exon149723   353   IV: 13191665-13192017 Caenorhabditis elegans
Exon149724   280   IV: 13192070-13192349 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58D2.2.1 13189767 13192349 1

1 Sequence

Length
1974

1 Sequence Ontology Term

Identifier Name Description
transcript