WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C48D1.1a Sequence Name  C48D1.1a
Length (nt)  1899   Chromosome Location  IV: 13193798-13193963
Chromosome . Primary Identifier  IV Chromosome Location . Start  13193798
Chromosome Location . End  13193963
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48D1.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE43632 C48D1.1, isoform a 72.6 632 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00042731
WBRNAi00012100
WBRNAi00029942

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C48D1.1a 13193798 13193963 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008177 C48D1.1 C48D1.1 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:C48D1.1a 13193798 13193963 -1
CDS:C48D1.1a 13194292 13194894 -1
CDS:C48D1.1a 13195226 13195499 -1
CDS:C48D1.1a 13195545 13195708 -1
CDS:C48D1.1a 13195825 13196090 -1
CDS:C48D1.1a 13196558 13196682 -1
CDS:C48D1.1a 13197032 13197274 -1
CDS:C48D1.1a 13197325 13197382 -1

1 Sequence

Length
1899

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C48D1.1a.1 C48D1.1a.1 2134   IV: 13193563-13197382