WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C48D1.2a Sequence Name  C48D1.2a
Length (nt)  1512   Chromosome Location  IV: 13199230-13199292
Chromosome . Primary Identifier  IV Chromosome Location . Start  13199230
Chromosome Location . End  13199292
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48D1.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29088 CED-3, isoform a 56.6 503 Caenorhabditis elegans
 

Other

25 RNAi

WormBase ID
WBRNAi00077190
WBRNAi00097559
WBRNAi00042732
WBRNAi00007269
WBRNAi00087666
WBRNAi00065428
WBRNAi00060982
WBRNAi00060983
WBRNAi00060984
WBRNAi00087675
WBRNAi00027590
WBRNAi00097925
WBRNAi00066191
WBRNAi00062689
WBRNAi00085818
WBRNAi00077441
WBRNAi00077443
WBRNAi00077442
WBRNAi00097658
WBRNAi00097556
WBRNAi00098457
WBRNAi00098460
WBRNAi00098461
WBRNAi00097528
WBRNAi00097914

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C48D1.2a 13199230 13199292 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000417 ced-3 C48D1.2 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:C48D1.2a 13199230 13199292 -1
CDS:C48D1.2a 13199769 13200008 -1
CDS:C48D1.2a 13200363 13200490 -1
CDS:C48D1.2a 13200545 13200758 -1
CDS:C48D1.2a 13201671 13202002 -1
CDS:C48D1.2a 13203191 13203444 -1
CDS:C48D1.2a 13203723 13203868 -1
CDS:C48D1.2a 13203932 13204066 -1

1 Sequence

Length
1512

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C48D1.2a.1 C48D1.2a.1 2552   IV: 13198261-13204137