WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C48D1.9b.1 Sequence Name  C48D1.9b.1
Length (nt)  480   Chromosome Location  IV: 13207468-13208931
Chromosome . Primary Identifier  IV Chromosome Location . Start  13207468
Chromosome Location . End  13208931 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48D1.9b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00194643 C48D1.9 C48D1.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C48D1.9b C48D1.9b 480   IV: 13207468-13207476

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C48D1.9b.1 13207468 13208931 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon149760   9   IV: 13207468-13207476 Caenorhabditis elegans
Exon149762   114   IV: 13208037-13208150 Caenorhabditis elegans
Exon149766   84   IV: 13208195-13208278 Caenorhabditis elegans
Exon149767   273   IV: 13208659-13208931 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C48D1.9b.1 13207468 13208931 -1

1 Sequence

Length
480

1 Sequence Ontology Term

Identifier Name Description
transcript