WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C48D1.3 Sequence Name  C48D1.3
Length (nt)  1731   Chromosome Location  IV: 13209959-13210069
Chromosome . Primary Identifier  IV Chromosome Location . Start  13209959
Chromosome Location . End  13210069
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48D1.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE27109 CHO-1 62.4 576 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00007265
WBRNAi00042733
WBRNAi00012101
WBRNAi00029943
WBRNAi00075846

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C48D1.3 13209959 13210069 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000501 cho-1 C48D1.3 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:C48D1.3 13209959 13210069 -1
CDS:C48D1.3 13211391 13211540 -1
CDS:C48D1.3 13211928 13212385 -1
CDS:C48D1.3 13212496 13212822 -1
CDS:C48D1.3 13213141 13213225 -1
CDS:C48D1.3 13213276 13213424 -1
CDS:C48D1.3 13213732 13213822 -1
CDS:C48D1.3 13213980 13214095 -1
CDS:C48D1.3 13214316 13214559 -1

1 Sequence

Length
1731

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C48D1.3.1 C48D1.3.1 1967   IV: 13209730-13214566