WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:C48D1.5a Sequence Name  C48D1.5a
Length (nt)  1591   Chromosome Location  IV: 13221978-13232030
Chromosome . Primary Identifier  IV Chromosome Location . Start  13221978
Chromosome Location . End  13232030 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48D1.5a

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008178 C48D1.5 C48D1.5 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C48D1.5a 13221978 13232030 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon149786   86   IV: 13221978-13222063 Caenorhabditis elegans
Exon149789   226   IV: 13222406-13222631 Caenorhabditis elegans
Exon149797   162   IV: 13222689-13222850 Caenorhabditis elegans
Exon149801   78   IV: 13223269-13223346 Caenorhabditis elegans
Exon149809   123   IV: 13228283-13228405 Caenorhabditis elegans
Exon149811   302   IV: 13229806-13230107 Caenorhabditis elegans
Exon149814   220   IV: 13230162-13230381 Caenorhabditis elegans
Exon149817   217   IV: 13230699-13230915 Caenorhabditis elegans
Exon149821   177   IV: 13231854-13232030 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C48D1.5a 13221978 13232030 1

1 Sequence

Length
1591

1 Sequence Ontology Term

Identifier Name Description
transcript