WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:JC8.2.1 Sequence Name  JC8.2.1
Length (nt)  1525   Chromosome Location  IV: 13233020-13236585
Chromosome . Primary Identifier  IV Chromosome Location . Start  13233020
Chromosome Location . End  13236585 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
JC8.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010435 pwp-1 JC8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:JC8.2 JC8.2 1404   IV: 13233136-13233339

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:JC8.2.1 13233020 13236585 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon149828   320   IV: 13233020-13233339 Caenorhabditis elegans
Exon149829   759   IV: 13234354-13235112 Caenorhabditis elegans
Exon149830   446   IV: 13236140-13236585 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:JC8.2.1 13233020 13236585 -1

1 Sequence

Length
1525

1 Sequence Ontology Term

Identifier Name Description
transcript