WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:C48D1.5g Sequence Name  C48D1.5g
Length (nt)  738   Chromosome Location  IV: 13229989-13232035
Chromosome . Primary Identifier  IV Chromosome Location . Start  13229989
Chromosome Location . End  13232035 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48D1.5g

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008178 C48D1.5 C48D1.5 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C48D1.5g 13229989 13232035 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon149868   119   IV: 13229989-13230107 Caenorhabditis elegans
Exon149871   220   IV: 13230162-13230381 Caenorhabditis elegans
Exon149874   217   IV: 13230699-13230915 Caenorhabditis elegans
Exon149878   182   IV: 13231854-13232035 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C48D1.5g 13229989 13232035 1

1 Sequence

Length
738

1 Sequence Ontology Term

Identifier Name Description
transcript