WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:JC8.5a.1 Sequence Name  JC8.5a.1
Length (nt)  945   Chromosome Location  IV: 13244324-13247160
Chromosome . Primary Identifier  IV Chromosome Location . Start  13244324
Chromosome Location . End  13247160 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
JC8.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010437 cox-11 JC8.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:JC8.5a JC8.5a 783   IV: 13244324-13244461

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:JC8.5a.1 13244324 13247160 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon149877   138   IV: 13244324-13244461 Caenorhabditis elegans
Exon149878   276   IV: 13245186-13245461 Caenorhabditis elegans
Exon149881   531   IV: 13246630-13247160 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:JC8.5a.1 13244324 13247160 1

1 Sequence

Length
945

1 Sequence Ontology Term

Identifier Name Description
transcript