WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:JC8.12a Sequence Name  JC8.12a
Length (nt)  948   Chromosome Location  IV: 13256186-13256217
Chromosome . Primary Identifier  IV Chromosome Location . Start  13256186
Chromosome Location . End  13256217
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
JC8.12a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29812 BUS-12, isoform a 35.6 315 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00049568
WBRNAi00033791
WBRNAi00111016
WBRNAi00110988

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:JC8.12a 13256186 13256217 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010442 bus-12 JC8.12 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:JC8.12a 13256186 13256217 1
CDS:JC8.12a 13256837 13256974 1
CDS:JC8.12a 13257080 13257339 1
CDS:JC8.12a 13257467 13257576 1
CDS:JC8.12a 13257952 13258020 1
CDS:JC8.12a 13258132 13258198 1
CDS:JC8.12a 13258327 13258501 1
CDS:JC8.12a 13258912 13259008 1

1 Sequence

Length
948

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:JC8.12a.1 JC8.12a.1 1016   IV: 13256186-13259076