WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y67H2A.1.1 Sequence Name  Y67H2A.1.1
Length (nt)  2394   Chromosome Location  IV: 13273846-13282878
Chromosome . Primary Identifier  IV Chromosome Location . Start  13273846
Chromosome Location . End  13282878 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y67H2A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013460 cpsf-3 Y67H2A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y67H2A.1 Y67H2A.1 2124   IV: 13274107-13274157

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y67H2A.1.1 13273846 13282878 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon150000   312   IV: 13273846-13274157 Caenorhabditis elegans
Exon150001   186   IV: 13274820-13275005 Caenorhabditis elegans
Exon150002   62   IV: 13276072-13276133 Caenorhabditis elegans
Exon150003   139   IV: 13276194-13276332 Caenorhabditis elegans
Exon150004   354   IV: 13277393-13277746 Caenorhabditis elegans
Exon150005   234   IV: 13278236-13278469 Caenorhabditis elegans
Exon150006   287   IV: 13279575-13279861 Caenorhabditis elegans
Exon150007   199   IV: 13280545-13280743 Caenorhabditis elegans
Exon150008   565   IV: 13281716-13282280 Caenorhabditis elegans
Exon150009   56   IV: 13282823-13282878 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y67H2A.1.1 13273846 13282878 -1

1 Sequence

Length
2394

1 Sequence Ontology Term

Identifier Name Description
transcript