WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W02A2.6a.1 Sequence Name  W02A2.6a.1
Length (nt)  2465   Chromosome Location  IV: 13349122-13353193
Chromosome . Primary Identifier  IV Chromosome Location . Start  13349122
Chromosome Location . End  13353193 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W02A2.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004333 rec-8 W02A2.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W02A2.6a W02A2.6a 2346   IV: 13349241-13349329

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W02A2.6a.1 13349122 13353193 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon150113   208   IV: 13349122-13349329 Caenorhabditis elegans
Exon150116   98   IV: 13349384-13349481 Caenorhabditis elegans
Exon150118   148   IV: 13349954-13350101 Caenorhabditis elegans
Exon150121   1445   IV: 13350599-13352043 Caenorhabditis elegans
Exon150122   116   IV: 13352486-13352601 Caenorhabditis elegans
Exon150123   197   IV: 13352650-13352846 Caenorhabditis elegans
Exon150124   200   IV: 13352892-13353091 Caenorhabditis elegans
Exon150125   53   IV: 13353141-13353193 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W02A2.6a.1 13349122 13353193 -1

1 Sequence

Length
2465

1 Sequence Ontology Term

Identifier Name Description
transcript