WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W02A2.7.1 Sequence Name  W02A2.7.1
Length (nt)  1975   Chromosome Location  IV: 13353723-13356104
Chromosome . Primary Identifier  IV Chromosome Location . Start  13353723
Chromosome Location . End  13356104 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W02A2.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003230 mex-5 W02A2.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W02A2.7 W02A2.7 1407   IV: 13353730-13353843

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W02A2.7.1 13353723 13356104 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon150126   121   IV: 13353723-13353843 Caenorhabditis elegans
Exon150127   521   IV: 13353892-13354412 Caenorhabditis elegans
Exon150128   424   IV: 13354458-13354881 Caenorhabditis elegans
Exon150129   149   IV: 13354932-13355080 Caenorhabditis elegans
Exon150130   760   IV: 13355345-13356104 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W02A2.7.1 13353723 13356104 1

1 Sequence

Length
1975

1 Sequence Ontology Term

Identifier Name Description
transcript