WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W02A2.5.1 Sequence Name  W02A2.5.1
Length (nt)  1686   Chromosome Location  IV: 13342855-13346408
Chromosome . Primary Identifier  IV Chromosome Location . Start  13342855
Chromosome Location . End  13346408 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W02A2.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012190 glr-9 W02A2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W02A2.5 W02A2.5 1464   IV: 13342858-13342983

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W02A2.5.1 13342855 13346408 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon150154   129   IV: 13342855-13342983 Caenorhabditis elegans
Exon150155   93   IV: 13343030-13343122 Caenorhabditis elegans
Exon150156   126   IV: 13343589-13343714 Caenorhabditis elegans
Exon150157   103   IV: 13343770-13343872 Caenorhabditis elegans
Exon150158   89   IV: 13343928-13344016 Caenorhabditis elegans
Exon150159   254   IV: 13344325-13344578 Caenorhabditis elegans
Exon150160   76   IV: 13344621-13344696 Caenorhabditis elegans
Exon150161   255   IV: 13345480-13345734 Caenorhabditis elegans
Exon150162   150   IV: 13345776-13345925 Caenorhabditis elegans
Exon150163   411   IV: 13345998-13346408 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W02A2.5.1 13342855 13346408 1

1 Sequence

Length
1686

1 Sequence Ontology Term

Identifier Name Description
transcript