WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y62E10A.1.1 Sequence Name  Y62E10A.1.1
Length (nt)  451   Chromosome Location  IV: 13369425-13370285
Chromosome . Primary Identifier  IV Chromosome Location . Start  13369425
Chromosome Location . End  13370285 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y62E10A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004410 rplp-2.2 Y62E10A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y62E10A.1 Y62E10A.1 333   IV: 13369538-13369678

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y62E10A.1.1 13369425 13370285 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon150159   254   IV: 13369425-13369678 Caenorhabditis elegans
Exon150160   135   IV: 13370032-13370166 Caenorhabditis elegans
Exon150161   62   IV: 13370224-13370285 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y62E10A.1.1 13369425 13370285 -1

1 Sequence

Length
451

1 Sequence Ontology Term

Identifier Name Description
transcript