WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y62E10A.6.1 Sequence Name  Y62E10A.6.1
Length (nt)  1492   Chromosome Location  IV: 13371999-13377383
Chromosome . Primary Identifier  IV Chromosome Location . Start  13371999
Chromosome Location . End  13377383 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y62E10A.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013376 Y62E10A.6 Y62E10A.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y62E10A.6 Y62E10A.6 1377   IV: 13371999-13372107

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y62E10A.6.1 13371999 13377383 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon150175   109   IV: 13371999-13372107 Caenorhabditis elegans
Exon150176   116   IV: 13372168-13372283 Caenorhabditis elegans
Exon150177   77   IV: 13372441-13372517 Caenorhabditis elegans
Exon150178   361   IV: 13373507-13373867 Caenorhabditis elegans
Exon150179   141   IV: 13375205-13375345 Caenorhabditis elegans
Exon150180   222   IV: 13375397-13375618 Caenorhabditis elegans
Exon150181   466   IV: 13376918-13377383 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y62E10A.6.1 13371999 13377383 1

1 Sequence

Length
1492

1 Sequence Ontology Term

Identifier Name Description
transcript