WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y62E10A.20.1 Sequence Name  Y62E10A.20.1
Length (nt)  859   Chromosome Location  IV: 13383738-13386091
Chromosome . Primary Identifier  IV Chromosome Location . Start  13383738
Chromosome Location . End  13386091 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y62E10A.20.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044745 Y62E10A.20 Y62E10A.20 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y62E10A.20 Y62E10A.20 663   IV: 13384317-13384386

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y62E10A.20.1 13383738 13386091 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon150199   67   IV: 13383738-13383804 Caenorhabditis elegans
Exon150200   92   IV: 13383866-13383957 Caenorhabditis elegans
Exon150203   104   IV: 13384283-13384386 Caenorhabditis elegans
Exon150205   136   IV: 13385398-13385533 Caenorhabditis elegans
Exon150206   376   IV: 13385577-13385952 Caenorhabditis elegans
Exon150207   84   IV: 13386008-13386091 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y62E10A.20.1 13383738 13386091 -1

1 Sequence

Length
859

1 Sequence Ontology Term

Identifier Name Description
transcript