WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y62E10A.12a Sequence Name  Y62E10A.12a
Length (nt)  309   Chromosome Location  IV: 13387469-13387582
Chromosome . Primary Identifier  IV Chromosome Location . Start  13387469
Chromosome Location . End  13387582
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y62E10A.12a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28143 LSM-3, isoform a 11.9 102 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00057844
WBRNAi00021220
WBRNAi00094393
WBRNAi00037668
WBRNAi00117283
WBRNAi00083666
WBRNAi00117304
WBRNAi00117293
WBRNAi00083850
WBRNAi00117313

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y62E10A.12a 13387469 13387582 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003077 lsm-3 Y62E10A.12 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y62E10A.12a 13387469 13387582 1
CDS:Y62E10A.12a 13387639 13387692 1
CDS:Y62E10A.12a 13388895 13389035 1

1 Sequence

Length
309

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y62E10A.12a.2 Y62E10A.12a.2 430   IV: 13387203-13389141
Transcript:Y62E10A.12a.1 Y62E10A.12a.1 417   IV: 13387469-13389143