WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y62E10A.17a.1 Sequence Name  Y62E10A.17a.1
Length (nt)  1213   Chromosome Location  IV: 13413555-13414871
Chromosome . Primary Identifier  IV Chromosome Location . Start  13413555
Chromosome Location . End  13414871 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y62E10A.17a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013383 aptf-2 Y62E10A.17 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y62E10A.17a Y62E10A.17a 1092   IV: 13413676-13413931

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y62E10A.17a.1 13413555 13414871 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon150293   377   IV: 13413555-13413931 Caenorhabditis elegans
Exon150295   344   IV: 13413988-13414331 Caenorhabditis elegans
Exon150297   492   IV: 13414380-13414871 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y62E10A.17a.1 13413555 13414871 -1

1 Sequence

Length
1213

1 Sequence Ontology Term

Identifier Name Description
transcript