WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K09B11.2a.1 Sequence Name  K09B11.2a.1
Length (nt)  1769   Chromosome Location  IV: 13422500-13429399
Chromosome . Primary Identifier  IV Chromosome Location . Start  13422500
Chromosome Location . End  13429399 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K09B11.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010709 nol-9 K09B11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K09B11.2a K09B11.2a 1650   IV: 13422502-13422610

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K09B11.2a.1 13422500 13429399 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon150322   111   IV: 13422500-13422610 Caenorhabditis elegans
Exon150323   98   IV: 13423365-13423462 Caenorhabditis elegans
Exon150324   186   IV: 13423512-13423697 Caenorhabditis elegans
Exon150325   142   IV: 13424613-13424754 Caenorhabditis elegans
Exon150326   94   IV: 13424802-13424895 Caenorhabditis elegans
Exon150327   187   IV: 13425771-13425957 Caenorhabditis elegans
Exon150328   189   IV: 13426263-13426451 Caenorhabditis elegans
Exon150329   191   IV: 13427318-13427508 Caenorhabditis elegans
Exon150330   331   IV: 13428153-13428483 Caenorhabditis elegans
Exon150333   240   IV: 13429160-13429399 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K09B11.2a.1 13422500 13429399 1

1 Sequence

Length
1769

1 Sequence Ontology Term

Identifier Name Description
transcript