WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K09B11.5a.1 Sequence Name  K09B11.5a.1
Length (nt)  1818   Chromosome Location  IV: 13431240-13434004
Chromosome . Primary Identifier  IV Chromosome Location . Start  13431240
Chromosome Location . End  13434004 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K09B11.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010712 K09B11.5 K09B11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K09B11.5a K09B11.5a 1770   IV: 13431288-13431695

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K09B11.5a.1 13431240 13434004 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon150335   456   IV: 13431240-13431695 Caenorhabditis elegans
Exon150337   555   IV: 13431792-13432346 Caenorhabditis elegans
Exon150339   399   IV: 13432423-13432821 Caenorhabditis elegans
Exon150341   216   IV: 13432900-13433115 Caenorhabditis elegans
Exon150343   129   IV: 13433165-13433293 Caenorhabditis elegans
Exon150345   63   IV: 13433942-13434004 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K09B11.5a.1 13431240 13434004 -1

1 Sequence

Length
1818

1 Sequence Ontology Term

Identifier Name Description
transcript