WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K09B11.9a.1 Sequence Name  K09B11.9a.1
Length (nt)  3418   Chromosome Location  IV: 13445440-13454798
Chromosome . Primary Identifier  IV Chromosome Location . Start  13445440
Chromosome Location . End  13454798 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K09B11.9a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010713 uso-1 K09B11.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K09B11.9a K09B11.9a 2826   IV: 13446032-13446175

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K09B11.9a.1 13445440 13454798 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon150367   736   IV: 13445440-13446175 Caenorhabditis elegans
Exon150368   144   IV: 13446725-13446868 Caenorhabditis elegans
Exon150370   746   IV: 13447292-13448037 Caenorhabditis elegans
Exon150372   221   IV: 13448082-13448302 Caenorhabditis elegans
Exon150374   383   IV: 13449279-13449661 Caenorhabditis elegans
Exon150376   253   IV: 13450167-13450419 Caenorhabditis elegans
Exon150378   85   IV: 13451393-13451477 Caenorhabditis elegans
Exon150380   251   IV: 13451531-13451781 Caenorhabditis elegans
Exon150382   245   IV: 13453036-13453280 Caenorhabditis elegans
Exon150384   156   IV: 13453344-13453499 Caenorhabditis elegans
Exon150386   96   IV: 13453686-13453781 Caenorhabditis elegans
Exon150387   102   IV: 13454697-13454798 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K09B11.9a.1 13445440 13454798 -1

1 Sequence

Length
3418

1 Sequence Ontology Term

Identifier Name Description
transcript