WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38H8A.7.1 Sequence Name  Y38H8A.7.1
Length (nt)  1106   Chromosome Location  IV: 13455500-13456815
Chromosome . Primary Identifier  IV Chromosome Location . Start  13455500
Chromosome Location . End  13456815 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38H8A.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012640 Y38H8A.7 Y38H8A.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38H8A.7 Y38H8A.7 420   IV: 13455506-13455595

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y38H8A.7.1 13455500 13456815 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon150388   96   IV: 13455500-13455595 Caenorhabditis elegans
Exon150389   84   IV: 13455643-13455726 Caenorhabditis elegans
Exon150390   94   IV: 13455796-13455889 Caenorhabditis elegans
Exon150391   100   IV: 13455934-13456033 Caenorhabditis elegans
Exon150392   732   IV: 13456084-13456815 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y38H8A.7.1 13455500 13456815 1

1 Sequence

Length
1106

1 Sequence Ontology Term

Identifier Name Description
transcript