WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38H8A.4.1 Sequence Name  Y38H8A.4.1
Length (nt)  1199   Chromosome Location  IV: 13470564-13472376
Chromosome . Primary Identifier  IV Chromosome Location . Start  13470564
Chromosome Location . End  13472376 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38H8A.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012638 Y38H8A.4 Y38H8A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38H8A.4 Y38H8A.4 996   IV: 13470633-13470867

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y38H8A.4.1 13470564 13472376 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon150402   304   IV: 13470564-13470867 Caenorhabditis elegans
Exon150403   311   IV: 13470921-13471231 Caenorhabditis elegans
Exon150404   323   IV: 13471477-13471799 Caenorhabditis elegans
Exon150405   105   IV: 13472068-13472172 Caenorhabditis elegans
Exon150406   156   IV: 13472221-13472376 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y38H8A.4.1 13470564 13472376 -1

1 Sequence

Length
1199

1 Sequence Ontology Term

Identifier Name Description
transcript