WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y45F10A.6b.1 Sequence Name  Y45F10A.6b.1
Length (nt)  3918   Chromosome Location  IV: 13476937-13502850
Chromosome . Primary Identifier  IV Chromosome Location . Start  13476937
Chromosome Location . End  13502850 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y45F10A.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012868 tbc-9 Y45F10A.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y45F10A.6b Y45F10A.6b 3738   IV: 13477112-13477151

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y45F10A.6b.1 13476937 13502850 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon150420   215   IV: 13476937-13477151 Caenorhabditis elegans
Exon150424   117   IV: 13477993-13478109 Caenorhabditis elegans
Exon150432   406   IV: 13478158-13478563 Caenorhabditis elegans
Exon150439   163   IV: 13479650-13479812 Caenorhabditis elegans
Exon150446   415   IV: 13480421-13480835 Caenorhabditis elegans
Exon150453   110   IV: 13481947-13482056 Caenorhabditis elegans
Exon150464   207   IV: 13485527-13485733 Caenorhabditis elegans
Exon150471   246   IV: 13486747-13486992 Caenorhabditis elegans
Exon150480   753   IV: 13487915-13488667 Caenorhabditis elegans
Exon150487   246   IV: 13489486-13489731 Caenorhabditis elegans
Exon150494   133   IV: 13489795-13489927 Caenorhabditis elegans
Exon150528   144   IV: 13497766-13497909 Caenorhabditis elegans
Exon150535   146   IV: 13497960-13498105 Caenorhabditis elegans
Exon150545   134   IV: 13499040-13499173 Caenorhabditis elegans
Exon150549   87   IV: 13499228-13499314 Caenorhabditis elegans
Exon150554   96   IV: 13500819-13500914 Caenorhabditis elegans
Exon150558   248   IV: 13500974-13501221 Caenorhabditis elegans
Exon150561   52   IV: 13502799-13502850 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y45F10A.6b.1 13476937 13502850 -1

1 Sequence

Length
3918

1 Sequence Ontology Term

Identifier Name Description
transcript